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Obesity in adult patients with inflammatory bowel disease: Clinical features and impact on disability. A cross-sectional survey from the GETAID

Rose Al Bacha , Yoram Bouhnik , Melanie Serrero , Jerome Filippi , Xavier Roblin et al.
Digestive and Liver Disease, 2023, ⟨10.1016/j.dld.2023.05.008⟩
Journal articles hal-04113898v1

Iatrogenic ureteral injury during colorectal surgery has a significant impact on patient outcomes: a French multicentric retrospective cohort study

Victor Sérénon , Philippe Rouanet , Diane Charleux-Muller , Clarisse Eveno , Karine Poirot et al.
Colorectal Disease, 2023, ⟨10.1111/codi.16630⟩
Journal articles hal-04113776v1
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Prevalence and determinants of fatigue in patients with IBD: a cross-sectional survey from the GETAID.

Aurelien Amiot , Sayma Chaibi , Yoram Bouhnik , Melanie Serrero , Jerome Filippi et al.
Journal of Crohn's & Colitis, 2023, pp.jjad060. ⟨10.1093/ecco-jcc/jjad060⟩
Journal articles hal-04052487v1
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Evolution of endoscopic lesions in steroid-refractory acute severe ulcerative colitis responding to infliximab or cyclosporine

David Laharie , Arnaud Bourreille , Julien Branche , Matthieu Allez , Yoram Bouhnik et al.
Clinical Gastroenterology and Hepatology, 2021, 19 (6), pp.1180-1188.e4. ⟨10.1016/j.cgh.2020.08.001⟩
Journal articles hal-03551241v1
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Identification des facteurs favorisant l’implantation des Escherichia coli adhérents et invasifs chez les patients atteints de maladie de Crohn : rôle de régulateurs épigénétiques et du régime alimentaire de type occidental

Mélissa Chervy
Médecine humaine et pathologie. Université Clermont Auvergne, 2022. Français. ⟨NNT : 2022UCFAC071⟩
Theses tel-04091813v1
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Genes mcr improve the intestinal fitness of pathogenic E. coli and balance their lifestyle to commensalism

Guillaume Dalmasso , Racha Beyrouthy , Sandrine Brugiroux , Etienne Ruppé , Laurent Guillouard et al.
Microbiome, 2023, 11 (1), pp.12. ⟨10.1186/s40168-022-01457-y⟩
Journal articles pasteur-04086913v1
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Editorial: real‐world evidence of tofacitinib and vedolizumab in ulcerative colitis—are we one step closer to better positioning therapies after anti‐TNF failure? Authors' reply

Anthony Buisson
Alimentary Pharmacology & Therapeutics (Suppl), 2023, 57 (6), pp.735-736. ⟨10.1111/apt.17405⟩
Journal articles hal-04056456v1

Gradient concentration strip–specific epidemiological cut-off values of antifungal drugs in various yeast species and five prevalent Aspergillus species complexes

Victor Mercier , Valérie Letscher-Bru , Marie-Elisabeth Bougnoux , Laurence Delhaes , Françoise Botterel et al.
Clinical Microbiology and Infection, 2022, S1198-743X (22), pp.00603-6. ⟨10.1016/j.cmi.2022.11.030⟩
Journal articles hal-03994435v1

Serpin-positive Bifidobacterium breve CNCM I-5644 improves intestinal permeability in two models of irritable bowel syndrome

Edgar Torres-Maravilla , Sophie Holowacz , Johanne Delannoy , Loïc Lenoir , Elsa Jacouton et al.
Scientific Reports, 2022, 12 (1), pp.19776. ⟨10.1038/s41598-022-21746-8⟩
Journal articles hal-03987260v1

Adalimumab in biologic-naïve patients with Crohn’s disease after resolution of an intra-abdominal abscess: a prospective study from the GETAID

Yoram Bouhnik , Guillaume Pineton de Chambrun , Jérôme Lambert , Maria Nachury , Philippe Seksik et al.
Clinical Gastroenterology and Hepatology, 2023, ⟨10.1016/j.cgh.2023.01.013⟩
Journal articles hal-03981017v1

Positive margins and plexitis increase the risk of recurrence after ileocecal resection: A systematic review and meta-analysis

Clara Yzet , Clémentine Riault , Franck Brazier , Lucien Grados , Eric Nguyen-Khac et al.
Digestive and Liver Disease, 2023, ⟨10.1016/j.dld.2022.12.021⟩
Journal articles hal-03958242v1
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Correlation between DNA Methylation and cell proliferation identifies new candidate predictive markers in meningioma

Sébastien Hergalant , Chloé Saurel , Marion Divoux , Fabien Rech , Celso Pouget et al.
Cancers, 2022, 14 (24), pp.6227. ⟨10.3390/cancers14246227⟩
Journal articles hal-03939191v1
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Mucolytic bacteria license pathobionts to acquire host-derived nutrients during dietary nutrient restriction

Kohei Sugihara , Sho Kitamoto , Prakaimuk Saraithong , Hiroko Nagao-Kitamoto , Matthew Hoostal et al.
Cell Reports, 2022, 40 (3), pp.111093. ⟨10.1016/j.celrep.2022.111093⟩
Journal articles hal-03907428v1
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An adherent-invasive Escherichia coli -colonized mouse model to evaluate microbiota-targeting strategies in Crohn's disease

Adeline Sivignon , Mélissa Chervy , Caroline Chevarin , Elia Ragot , Elisabeth Billard et al.
Disease Models & Mechanisms, 2022, 15 (10), pp.dmm049707. ⟨10.1242/dmm.049707⟩
Journal articles hal-03907399v1
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Determination of biomarkers associated with neoadjuvant treatment response focusing on colibactin-producing Escherichia coli in patients with mid or low rectal cancer: a prospective clinical study protocol (MICARE)

Christophe Taoum , Guillaume Carrier , Marta Jarlier , Gwenaelle Roche , Johan Gagniere et al.
BMJ Open, 2022, 12 (12), pp.e061527. ⟨10.1136/bmjopen-2022-061527⟩
Journal articles hal-03907379v1

Safety of Vaccination against SARS-CoV-2 in People with Rheumatic and Musculoskeletal Diseases: Results from the EULAR Coronavirus Vaccine (COVAX) Physician-Reported Registry

Pedro M Machado , Saskia Lawson-Tovey , Anja Strangfeld , Elsa F Mateus , Kimme L Hyrich et al.
Annals of the Rheumatic Diseases, 2022, 81 (5), pp.695--709. ⟨10.1136/annrheumdis-2021-221490⟩
Journal articles hal-03896047v1

Impact of HIV Infection on the Course of Inflammatory Bowel Disease and Drug Safety Profile: A Multicenter GETAID Study

Lucas Guillo , Mathieu Uzzan , Laurent Beaugerie , Jean-Marc Gornet , Aurélien Amiot et al.
Clinical Gastroenterology and Hepatology, 2022, 20 (4), pp.787-797.e2. ⟨10.1016/j.cgh.2020.12.023⟩
Journal articles hal-03888141v1

Evaluation of the Bio-Evolution Microsporidia generic and typing real-time PCR assays for the diagnosis of intestinal microsporidiosis

Maxime Moniot , Céline Nourrisson , Virginie Bonnin , Céline Damiani , Nicolas Argy et al.
Parasite, 2022, 29 (55), pp.1-8. ⟨10.1051/parasite/2022055⟩
Journal articles hal-03881459v1
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Epigenetic master regulators HDAC1 and HDAC5 control pathobiont Enterobacteria colonization in ileal mucosa of Crohn’s disease patients

Mélissa Chervy , Adeline Sivignon , Flavie Dambrine , Anthony Buisson , Pierre Sauvanet et al.
Gut microbes, 2022, 14 (1), pp.1-13. ⟨10.1080/19490976.2022.2127444⟩
Journal articles hal-03881385v1

Role of megaplasmids and chromosomal integration in acquisition of CTX-M-encoding genes by Pseudomonas aeruginosa

Pauline Triponney , Maxime Bour , Racha Beyrouthy , Richard Bonnet , Patrick Plésiat et al.
Journal of Antimicrobial Chemotherapy, 2022, 77 (11), pp.3194-3198. ⟨10.1093/jac/dkac302⟩
Journal articles hal-03880013v1
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Probiotics/synbiotics to reduce infectious complications after colorectal Surgery: A systematic review and meta-analysis of randomised controlled trials

Julie Veziant , Mathilde Bonnet , Bob V. Occean , Chadly Dziri , Bruno Pereira et al.
Nutrients, 2022, 14 (15), pp.1-16/3066. ⟨10.3390/nu14153066⟩
Journal articles hal-03879973v1
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Evaluation of an antibiotics susceptibility testing method on enterobacterales-positive blood Cultures in less than 8 h using the rapid mueller-hinton diffusion method in conjunction with the SIRscan 2000 automatic reading device

Mathilde Payen , Alice Gaudart , Kevin Legueult , James Kasprzak , Audrey Emery et al.
Microorganisms, 2022, 10 (7), pp.1-15/1377. ⟨10.3390/microorganisms10071377⟩
Journal articles hal-03870270v1

Real‐world comparison of effectiveness between tofacitinib and vedolizumab in patients with ulcerative colitis exposed to at least one anti‐ TNF agent

Anthony Buisson , Maria Nachury , Thomas Guilmoteau , Romain Altwegg , Xavier Treton et al.
Alimentary Pharmacology & Therapeutics (Suppl), 2022, pp.1-13. ⟨10.1111/apt.17305⟩
Journal articles hal-03870253v1

Checking the absence of inflammatory activity with an objective marker, a key point to succeed the switch from intravenous to subcutaneous infliximab in inflammatory bowel disease

Anthony Buisson , Maria Nachury , Mathurin Fumery
Clinical Gastroenterology and Hepatology, 2022, ⟨10.1016/j.cgh.2022.11.006⟩
Journal articles hal-03870157v1

Genomic analysis of CTX-M-115 and OXA-23/-72 co-producing Acinetobacter baumannii , and their potential to spread resistance genes by natural transformation

Jean-Baptiste Vuillemenot , Maxime Bour , Racha Beyrouthy , Richard Bonnet , Maria-Halima Laaberki et al.
Journal of Antimicrobial Chemotherapy, 2022, 77 (6), pp.1542-1552. ⟨10.1093/jac/dkac099⟩
Journal articles hal-03870143v1
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Host colonization as a major evolutionary force favoring the diversity and the emergence of the worldwide multidrug-resistant Escherichia coli ST131

Richard Bonnet , Racha Beyrouthy , Marisa Haenni , Marie-Hélène Nicolas-Chanoine , Guillaume Dalmasso et al.
mBio, 2021, 12 (4), pp.1-12. ⟨10.1128/mBio.01451-21⟩
Journal articles hal-03846817v1
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Role of mucus-bacteria interactions in Enterotoxigenic Escherichia coli (ETEC) H10407 virulence and interplay with human microbiome

Thomas Sauvaitre , Josefien van Landuyt , Claude Durif , Charlène Roussel , Adeline Sivignon et al.
npj Biofilms and Microbiomes, 2022, 8 (1), pp.86. ⟨10.1038/s41522-022-00344-6⟩
Journal articles hal-03832893v1
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Dietary Emulsifiers Directly Impact Adherent-Invasive E. coli Gene Expression to Drive Chronic Intestinal Inflammation

Emilie Viennois , Alexis Bretin , Philip Dubé , Alexander Maue , Charlène J.G. Dauriat et al.
Cell Reports, 2020, 33 (1), pp.108229. ⟨10.1016/j.celrep.2020.108229⟩
Journal articles hal-03042975v1
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The cnf1 gene is associated with an expanding Escherichia coli ST131 H 30Rx/C2 subclade and confers a competitive advantage for gut colonization

Landry L. Tsoumtsa Meda , Luce Landraud , Serena Petracchini , Stéphane Descorps-Declere , Emeline Perthame et al.
Gut microbes, In press, 14 (1), pp.1-21. ⟨10.1080/19490976.2022.2121577⟩
Journal articles pasteur-03797969v2

Comparison of the risk of Crohn's disease postoperative recurrence between modified Rutgeerts score i2a and i2b categories: an individual patient data meta-analysis

Pauline Rivière , Joel Pekow , Nassim Hammoudi , Pauline Wils , Peter de Cruz et al.
Journal of Crohn's & Colitis, 2022, pp.jjac137. ⟨10.1093/ecco-jcc/jjac137⟩
Journal articles hal-03783917v1