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A Hybrid Approach for Fast Simulation of Dose Deposition in Stereotactic Synchrotron Radiotherapy

Nicolas Freud , Jean Michel Létang , Mary Corentin , Caroline Boudou , Claudio Ferrero et al.
IEEE Transactions on Nuclear Science, 2008, 55 (3), pp.1008 - 1017. ⟨10.1109/TNS.2008.922831⟩
Journal articles hal-00639671v1
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Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge.

Keelin Murphy , Bram van Ginneken , Joseph M. Reinhardt , Sven Kabus , Kai Ding et al.
IEEE Transactions on Medical Imaging, 2011, 30 (11), pp.1901-20. ⟨10.1109/TMI.2011.2158349⟩
Journal articles inserm-00607794v1

Can Voronoi diagram model cell geometries in early sea-urchin embryogenesis ?

Miguel Angel Luengo-Oroz , Louise Duloquin , Carlos Castro-González , Thierry Savy , Emmanuel Faure et al.
Biomedical Imaging: From Nano to Macro, IEEE, pp.504-507, 2008, IEEE International Symposium on Biomedical Imaging Vomues 1-4, 978-1-4244-2002-5. ⟨10.1109/ISBI.2008.4541043⟩
Book sections hal-00723387v1

Design Guidelines for a Double Scattering Compton Camera for Prompt-gamma Imaging During Ion Beam Therapy: A Monte Carlo Simulation Study

M.-H. Richard , M. Chevallier , D. Dauvergne , N. Freud , P. Henriquet et al.
IEEE Transactions on Nuclear Science, 2010, 58, pp.87-94. ⟨10.1109/TNS.2010.2076303⟩
Journal articles in2p3-00527432v1

Methods toward in vivo measurement of zebrafish epithelial and deep cell proliferation.

Matteo Campana , Benoit Maury , Marie Dutreix , Nadine Peyriéras , Alessandro Sarti et al.
Computer Methods and Programs in Biomedicine, 2009, 98 (2), pp.103-117. ⟨10.1016/j.cmpb.2009.08.008⟩
Journal articles istex hal-00444523v1

Segmentation of cells from 3-D confocal images of live zebrafish embryo.

Cecilia Zanella , Barbara Rizzi , Camilo Melani , Matteo Campana , Paul Bourgine et al.
Conference proceedings : .. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 2007, 2007, pp.6028-31. ⟨10.1109/IEMBS.2007.4353722⟩
Journal articles hal-00275363v1

GATE V6: a major enhancement of the GATE simulation platform enabling modelling of CT and radiotherapy

S. Jan , D. Benoit , E. Becheva , T. Carlier , F. Cassol et al.
Physics in Medicine and Biology, 2011, 56, pp.881-901. ⟨10.1088/0031-9155/56/4/001⟩
Journal articles istex in2p3-00559709v1

The GC-heterogeneity of teleost fishes

C. Melodelima , Christian Gautier
BMC Genomics, 2008, 9 (1), pp.632. ⟨10.1186/1471-2164-9-632⟩
Journal articles halsde-00377984v1
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Anomalous subdiffusion due to obstacles : A critical survey

Hugues Berry , Hugues Chaté
Other publications inria-00575651v1
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A 3D mechanical model of the early mammalian embryo

Laurent Le Guillou , Nicolas Dard , Jérôme Glisse , Bernard Maro , Sophie Louvet-Vallée et al.
Journal of Biological Physics and Chemistry, 2009, 9, pp.11
Journal articles in2p3-00453960v1

Combining sea urchin embryo cell lineages by error-tolerant graph matching.

José L. Rubio-Guivernau , Miguel Angel Luengo-Oroz , Louise Duloquin , Thierry Savy , Nadine Peyriéras et al.
Conference proceedings : .. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 2009, 1, pp.5918-21. ⟨10.1109/IEMBS.2009.5334851⟩
Journal articles hal-00444506v1

Alignment-free ultra-high-throughput comparison of druggable protein-ligand binding sites.

Nathanaël Weill , Didier Rognan
Journal of Chemical Information and Modeling, 2010, 50 (1), pp.123-35. ⟨10.1021/ci900349y⟩
Journal articles hal-00620861v1

3D+t Morphological Processing: Applications to Embryogenesis Image Analysis.

Miguel Angel Luengo-Oroz , David Pastor-Escuredo , Carlos Castro-González , Emmanuel Faure , Thierry Savy et al.
IEEE Transactions on Image Processing, 2012, 21 (8), pp.3518 - 3530. ⟨10.1109/TIP.2012.2197007⟩
Journal articles hal-00723216v1

Automatic morphometry in Alzheimer's disease and mild cognitive impairment.

Rolf A Heckemann , Shiva Keihaninejad , Paul Aljabar , Katherine R Gray , Casper Nielsen et al.
NeuroImage, 2011, 56 (4), pp.2024-37. ⟨10.1016/j.neuroimage.2011.03.014⟩
Journal articles hal-00638911v1

Identitag, a relational database for SAGE tag identification and interspecies comparison of SAGE libraries.

Céline Keime , Francesca Damiola , Dominique Mouchiroud , Laurent Duret , Olivier Gandrillon et al.
BMC Bioinformatics, 2004, 5, pp.143. ⟨10.1186/1471-2105-5-143⟩
Journal articles hal-00193784v1

UV-Targeted Dinucleotides Are Not Depleted in Light-Exposed Prokaryotic Genomes

L. Palmeira , Laurent Guéguen , J.R. Lobry
Molecular Biology and Evolution, 2006, 23, pp.2214-2219
Journal articles hal-00428052v1

Dense genome-wide linkage analysis of rheumatoid arthritis, including covariates.

José Osorio y Fortéa , Hulya Bukulmez , Elisabeth Petit-Teixeira , Laétitia Michou , Céline Pierlot et al.
Arthritis and Rheumatism, 2004, 50 (9), pp.2757-65. ⟨10.1002/art.20458⟩
Journal articles hal-00563970v1

Origin and molecular evolution of receptor tyrosine kinases with immunoglobulin-like domains.

Julien Grassot , Manolo Gouy , Guy Perrière , Guy Mouchiroud
Molecular Biology and Evolution, 2006, 23 (6), pp.1232-41. ⟨10.1093/molbev/msk007⟩
Journal articles hal-00192848v1

A Mixture Model and a Hidden Markov Model to Simultaneously Detect Recombination Breakpoints and Reconstruct Phylogenies

Bastien Boussau , Laurent Guéguen , Manolo Gouy
Evolutionary Bioinformatics, 2009, 5, pp.67-79. ⟨10.4137/EBO.S2242⟩
Journal articles hal-00428395v1

PhEVER: a database for the global exploration of virus-host evolutionary relationships.

Leonor Palmeira , Simon Penel , Vincent Lotteau , Chantal Rabourdin-Combe , Christian Gautier et al.
Nucleic Acids Research, 2011, 39 (Database issue), pp.D569-75. ⟨10.1093/nar/gkq1013⟩
Journal articles hal-00562509v1

Efficient Exploration of the Space of Reconciled Gene Trees.

Gergely J Szöllosi , Wojciech Rosikiewicz , Bastien Boussau , Eric Tannier , Vincent Daubin et al.
Systematic Biology, 2013, 62 (6), pp.901-912. ⟨10.1093/sysbio/syt054⟩
Journal articles hal-00856826v1

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases.

Jean-François Dufayard , L. Duret , Simon Penel , Manolo Gouy , F. Rechenmann et al.
Bioinformatics, 2005, 21 (11), pp.2596-603. ⟨10.1093/bioinformatics/bti325⟩
Journal articles hal-00427861v1
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Cell lineage reconstruction of early zebrafish embryos using label-free nonlinear microscopy

Nicolas Olivier , Miguel Angel Luengo-Oroz , Louise Duloquin , Emmanuel Faure , Thierry Savy et al.
Science, 2010, 329 (5994), pp.967-71. ⟨10.1126/science.1189428⟩
Journal articles hal-00519834v1

3D early embryogenesis image filtering by nonlinear partial differential equations.

Zuzana Krivá , Karol Mikula , Nadine Peyriéras , Barbara Rizzi , Alessandro Sarti et al.
Medical Image Analysis, 2010, 14 (4), pp.510-526. ⟨10.1016/⟩
Journal articles istex hal-00502622v1

Segmentation of 3D cell membrane images by PDE methods and its applications.

Karol Mikula , Nadine Peyriéras , Mariana Remešíková , Olga Stašová
Computers in Biology and Medicine, 2011, 41 (6), pp.326-39. ⟨10.1016/j.compbiomed.2011.03.010⟩
Journal articles istex hal-00625249v1

Selective structure-based virtual screening for full and partial agonists of the beta2 adrenergic receptor.

Chris de Graaf , Didier Rognan
Journal of Medicinal Chemistry, 2008, 51 (16), pp.4978-85. ⟨10.1021/jm800710x⟩
Journal articles istex hal-00620778v1
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Databases of Homologous Gene Families for Comparative Genomics

Simon Penel , Anne-Muriel Arigon Chifolleau , Jean-François Dufayard , Anne-Sophie Sertier , Vincent Daubin et al.
BMC Bioinformatics, 2009, 10 (Suppl.6) :S3, pp.13. ⟨10.1186/1471-2105-10-S6-S3⟩
Journal articles lirmm-00400099v1
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L’évolution modulaire des protéines : un point de vue phylogénétique

Anne-Sophie Sertier
Sciences agricoles. Université Claude Bernard - Lyon I, 2011. Français. ⟨NNT : 2011LYO10153⟩
Theses tel-00842255v1
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Lateral gene transfer as a support for the tree of life.

Sophie S Abby , Eric Tannier , Manolo Gouy , Vincent Daubin
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (13), pp.4962-4967. ⟨10.1073/pnas.1116871109⟩
Journal articles hal-00752055v1

A multi-resolution approach for content-based image retrieval on the Grid--application to breast cancer detection.

K. Hassan , T. Tweed , S. Miguet
Methods of Information in Medicine, 2005, 44 (2), pp.211-4. ⟨10.1267/METH05020211⟩
Journal articles hal-00633174v1