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Evaluation of MRI-based machine learning approaches for computer-aided diagnosis of dementia in a clinical data warehouse

Simona Bottani , Ninon Burgos , Aurélien Maire , Dario Saracino , Sebastian Ströer et al.
2023
Preprints, Working Papers, ... hal-03656136v2
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Impact of sex and APOE-ε4 genotype on patterns of regional brain atrophy in Alzheimer's Disease and healthy ageing

Benoît Sauty , Stanley Durrleman
Frontiers in Neurology, 2023, Frontiers in Neurology, section Dementia and Neurodegenerative Diseases., 14, ⟨10.3389/fneur.2023.1161527⟩
Journal articles hal-03778801v4
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Evaluating machine learning models and their diagnostic value

Gaël Varoquaux , Olivier Colliot
Olivier Colliot. Machine Learning for Brain Disorders, Springer, 2023
Book sections hal-03682454v5
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Machine learning for Parkinson’s disease and related disorders

Johann Faouzi , Olivier Colliot , Jean-Christophe Corvol
Olivier Colliot. Machine Learning for Brain Disorders, Springer, In press
Book sections hal-03830073v1
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Classic machine learning algorithms

Johann Faouzi , Olivier Colliot
Olivier Colliot. Machine Learning for Brain Disorders, Springer, In press
Book sections hal-03830094v3
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Reproducibility in machine learning for medical imaging

Olivier Colliot , Elina Thibeau-Sutre , Ninon Burgos
Olivier Colliot. Machine Learning for Brain Disorders, Springer, In press
Book sections hal-03957240v2
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Interpretability of Machine Learning Methods Applied to Neuroimaging

Elina Thibeau-Sutre , Sasha Collin , Ninon Burgos , Olivier Colliot
Olivier Colliot. Machine Learning for Brain Disorders, Springer, In press
Book sections hal-03615163v1
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Multivariate disease progression modelling with longitudinal ordinal data

Pierre‐emmanuel Poulet , Stanley Durrleman
Statistics in Medicine, 2023, ⟨10.1002/sim.9770⟩
Journal articles hal-04095450v1
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Scrolling 2D U-Net for the 3D segmentation of the internal carotid artery

Arya Yazdan-Panah , Guanghui Fu , Didier Dormont , Bruno Stankoff , Olivier Colliot et al.
2023
Preprints, Working Papers, ... hal-04090342v1
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Holographic EEG: multi-view deep learning for BCI

Igor Carrara , Bruno Aristimunha , Sylvain Chevallier , Marie-Constance Corsi , Théodore Papadopoulo et al.
Journée CORTICO 2023 - COllectif pour la Recherche Transdisciplinaire sur les Interfaces Cerveau-Ordinateur, May 2023, Paris, France.
Conference poster hal-04095900v1
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Scrolling 2D U-Net for the 3D segmentation of small vessels on 7T magnetic resonance angiography

Arya Yazdan-Panah , Rosana El Jurdi , Guanghui Fu , Janan Arslan , Romain Valabregue et al.
2023
Preprints, Working Papers, ... hal-04090356v1
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CONCERTO: Coherence & Functional Connectivity Graph Network

Bruno Aristimunha , Raphael Yokoingawa De Camargo , Walter Hugo Lopez Pinaya , Florian Yger , Marie-Constance Corsi et al.
Journée CORTICO 2023, May 2023, Paris, France. 2023
Conference poster hal-04121445v1
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Phagocytosis Unveiled: A Scalable and Interpretable Deep learning Framework for Neurodegenerative Disease Analysis

Mehdi Ounissi , Morwena Latouche , Daniel Racoceanu
2023
Preprints, Working Papers, ... hal-04067345v1
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Impact of sex and APOE-ε4 genotype on regional brain metabolism in Alzheimer's Disease

Benoît Sauty , Stanley Durrleman​
ISBI 2023 - IEEE 20th International Symposium on Biomedical Imaging, Apr 2023, Cartagena (Colombia), Colombia
Conference papers hal-03951468v1
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How precise are performance estimates for typical medical image segmentation tasks?

Rosana El Jurdi , Olivier Colliot
IEEE International Symposium on Biomedical Imaging (ISBI 2023), IEEE, Apr 2023, Cartagena de Indias, Colombia
Conference papers hal-04104891v1
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Operationalizing the centiloid scale for [18 F]florbetapir PET studies on PET/MRI

William Coath , Marc Modat , M. Jorge Cardoso , Pawel Markiewicz , Christopher Lane et al.
Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring, 2023, 15 (2), ⟨10.1002/dad2.12434⟩
Journal articles hal-04099627v1
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Reconstruction vasculaire 3D et analyse de lames virtuelles H&E dans l'étude du mélanome

Janan Arslan , Haocheng Luo , Pawan Kumar , Matthieu Lacroix , Pierrick Dupré et al.
IABM2023 : Colloque Français d'Intelligence Artificielle en Imagerie Biomédicale, Mar 2023, Paris, France
Conference papers hal-03928851v1
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Automatic segmentation of the choroid plexuses: Method and validation in controls and patients with multiple sclerosis

Arya Yazdan-Panah , Marius Schmidt-Mengin , Vito A.G. Ricigliano , Théodore Soulier , Bruno Stankoff et al.
Neuroimage-Clinical, 2023, 38, pp.103368. ⟨10.1016/j.nicl.2023.103368⟩
Journal articles hal-04026889v1
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Comparison of mean diffusivity, R2* relaxation rate and morphometric biomarkers for the clinical differentiation of parkinsonism

Lydia Chougar , François-Xavier Lejeune , Johann Faouzi , Benjamin Morino , Alice Faucher et al.
Parkinsonism & Related Disorders, 2023, 108, pp.105287. ⟨10.1016/j.parkreldis.2023.105287⟩
Journal articles hal-04041736v1
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A meta-graph approach for analyzing whole slide histopathological images of human brain tissue with Alzheimer's disease biomarkers

Gabriel Jiménez , Pablo Mas , Anuradha Kar , Léa Ingrassia , Susana Boluda et al.
SPIE Medical Imaging 2022, SPIE, Feb 2023, San Diego, United States
Conference papers hal-03936684v1
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Efficient 3D Reconstruction of H&E Whole Slide Images in Melanoma

Janan Arslan , Mehdi Ounissi , Haocheng Luo , Matthieu Lacroix , Pierrick Dupré et al.
SPIE Medical Imaging 2023, Feb 2023, San Diego, California, United States
Conference papers hal-03834014v2
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Introducing Soft Topology Constraints in Deep Learning-based Segmentation using Projected Pooling Loss

Guanghui Fu , Rosana El Jurdi , Lydia Chougar , Didier Dormont , Romain Valabregue et al.
SPIE Medical Imaging 2023, Feb 2023, San Diego, United States
Conference papers hal-03832309v2
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Simulation-based evaluation framework for deep learning unsupervised anomaly detection on brain FDG PET

Ravi Hassanaly , Simona Bottani , Benoît Sauty , Olivier Colliot , Ninon Burgos et al.
SPIE Medical Imaging, Feb 2023, San Diego, United States
Conference papers hal-03835015v2
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How can data augmentation improve attribution maps for disease subtype explainability?

Elina Thibeau-Sutre , Jelmer M Wolterink , Olivier Colliot , Ninon Burgos
SPIE Medical Imaging, Feb 2023, San Diego, United States
Conference papers hal-03966737v1
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Interpretable automatic detection of incomplete hippocampal inversions using anatomical criteria

Lisa J Hemforth , Claire Cury , Vincent Frouin , Sylvane Desrivières , Antoine Grigis et al.
SPIE Medical Imaging 2023, Feb 2023, San Diego (California), United States. pp.1-7
Conference papers hal-03994348v1
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Transfer learning from synthetic to routine clinical data for motion artefact detection in brain T1-weighted MRI

Sophie Loizillon , Simona Bottani , Aurélien Maire , Sebastian Ströer , Didier Dormont et al.
SPIE Medical Imaging 2023: Image Processing, Feb 2023, San Diego, United States
Conference papers hal-03831746v2
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Forecasting individual progression trajectories in Alzheimer’s disease

Etienne Maheux , Igor Koval , Juliette Ortholand , Colin Birkenbihl , Damiano Archetti et al.
Nature Communications, 2023, 14 (1), pp.761. ⟨10.1038/s41467-022-35712-5⟩
Journal articles hal-04023781v1
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Specificities of Meningitis and Meningo-Encephalitis After Kidney Transplantation: A French Retrospective Cohort Study

Yanis Tamzali , Anne Scemla , Thomas Bonduelle , Claire Garandeau , M. Gilbert et al.
Transplant International, 2023, 36, pp.10765. ⟨10.3389/ti.2023.10765⟩
Journal articles hal-03996962v1

A quantified comparison of cortical atlases on the basis of trait morphometricity

Anna Fürtjes , James Cole , Baptiste Couvy-Duchesne , Stuart Ritchie
Cortex, 2023, 158, pp.110-126. ⟨10.1016/j.cortex.2022.11.001⟩
Journal articles hal-03918221v1
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A non-technical introduction to machine learning

Olivier Colliot
Olivier Colliot. Machine Learning for Brain Disorders, 197, Springer, 2023, Neuromethods
Book sections hal-03957125v3